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Slin_4715 protein (Spirosoma linguale) - STRING interaction network
"Slin_4715" - Hypothetical protein in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_4715Hypothetical protein (394 aa)    
Predicted Functional Partners:
Slin_4716
Hypothetical protein (701 aa)
              0.845
Slin_3567
Glycoside hydrolase family protein (710 aa)
 
          0.654
Slin_4783
RagB/SusD domain-containing protein (548 aa)
   
          0.639
Slin_4717
Oxidoreductase domain-containing protein (448 aa)
              0.576
Slin_1526
CDP-alcohol phosphatidyltransferase (428 aa)
   
          0.576
Slin_1527
PA-phosphatase-like phosphoesterase (311 aa)
   
          0.566
Slin_0535
NIPSNAP family containing protein (267 aa)
   
          0.551
Slin_6588
Sodium solute transporter (529 aa)
   
          0.534
Slin_5622
Acetyl xylan esterase (407 aa)
   
          0.520
Slin_5488
Xylose isomerase (285 aa)
   
          0.519
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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