STRINGSTRING
Slin_4722 protein (Spirosoma linguale) - STRING interaction network
"Slin_4722" - Immunoglobulin V-set domain-containing protein in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_4722Immunoglobulin V-set domain-containing protein (994 aa)    
Predicted Functional Partners:
Slin_3366
Hypothetical protein (284 aa)
   
          0.672
Slin_1871
Hypothetical protein (794 aa)
   
          0.635
Slin_4723
NHL repeat containing protein (1079 aa)
 
       
0.627
Slin_3865
Hypothetical protein (822 aa)
   
          0.592
Slin_2373
Hypothetical protein (619 aa)
   
          0.568
Slin_3265
Hypothetical protein (127 aa)
   
          0.552
Slin_1645
Hypothetical protein (300 aa)
   
          0.538
Slin_3835
Hypothetical protein (137 aa)
   
          0.529
Slin_2661
Hypothetical protein (792 aa)
   
          0.528
Slin_2836
Hypothetical protein (469 aa)
   
          0.507
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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