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Slin_4748 protein (Spirosoma linguale) - STRING interaction network
"Slin_4748" - Hypothetical protein in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_4748Hypothetical protein (318 aa)    
Predicted Functional Partners:
Slin_5685
Glycosyl transferase-like protein UDP- glucuronosyltransferase (382 aa)
   
          0.676
Slin_4380
RagB/SusD domain-containing protein (478 aa)
   
          0.672
Slin_0962
TonB-dependent receptor plug (1060 aa)
   
          0.670
Slin_0963
RagB/SusD domain-containing protein (514 aa)
   
          0.669
Slin_4749
Large conductance mechanosensitive channel protein (110 aa)
              0.661
Slin_3947
Hypothetical protein (514 aa)
   
          0.646
Slin_5545
Hypothetical protein (165 aa)
   
          0.642
Slin_0657
Hypothetical protein (222 aa)
   
          0.638
Slin_6568
RagB/SusD domain-containing protein (502 aa)
   
          0.632
Slin_4042
TonB-dependent receptor (1026 aa)
   
          0.631
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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