STRINGSTRING
Slin_4762 protein (Spirosoma linguale) - STRING interaction network
"Slin_4762" - Endonuclease/exonuclease/phosphatase in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_4762Endonuclease/exonuclease/phosphatase (299 aa)    
Predicted Functional Partners:
Slin_4761
RagB/SusD domain-containing protein (590 aa)
 
          0.746
Slin_4760
TonB-dependent receptor plug (1100 aa)
 
          0.721
Slin_5524
Alpha-1,2-mannosidase (774 aa)
 
          0.533
Slin_4029
Hypothetical protein (475 aa)
 
          0.517
Slin_5726
Glycoside hydrolase (656 aa)
   
          0.492
Slin_6287
RagB/SusD domain-containing protein (531 aa)
   
          0.484
Slin_6436
Histidine kinase (1418 aa)
   
        0.466
Slin_0768
Glycosidase PH1107-like protein (357 aa)
   
          0.460
Slin_4976
Endonuclease/exonuclease/phosphatase (266 aa)
   
          0.442
Slin_6054
RagB/SusD domain-containing protein (499 aa)
 
          0.441
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
Server load: low (10%) [HD]