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Slin_4767 protein (Spirosoma linguale) - STRING interaction network
"Slin_4767" - Isocitrate dehydrogenase in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_4767Isocitrate dehydrogenase (405 aa)    
Predicted Functional Partners:
Slin_2025
Aconitate hydratase (755 aa)
   
  0.961
Slin_5027
2-oxoglutarate dehydrogenase, E1 subunit (932 aa)
     
 
  0.950
Slin_6035
Dihydrolipoamide dehydrogenase (466 aa)
     
 
  0.917
Slin_5752
Dihydrolipoamide dehydrogenase (466 aa)
     
 
  0.917
Slin_3335
Isocitrate dehydrogenase (482 aa)
   
  0.909
Slin_2319
Glutamate synthase (1524 aa)
   
 
  0.890
Slin_5648
Glu/Leu/Phe/Val dehydrogenase (424 aa)
     
  0.871
Slin_4403
Class I and II aminotransferase (405 aa)
   
 
  0.842
Slin_1914
Class I and II aminotransferase (403 aa)
   
 
  0.842
Slin_4408
Aldehyde dehydrogenase (457 aa)
   
 
  0.835
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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