STRINGSTRING
Slin_4773 protein (Spirosoma linguale) - STRING interaction network
"Slin_4773" - Cytochrome C class I in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_4773Cytochrome C class I (669 aa)    
Predicted Functional Partners:
Slin_4772
Hypothetical protein (628 aa)
          0.933
Slin_1879
Hypothetical protein (629 aa)
 
          0.778
Slin_5811
Dehydrogenase (1040 aa)
   
          0.770
Slin_0335
PKD domain-containing protein (984 aa)
   
          0.764
Slin_4672
PKD domain-containing protein (941 aa)
   
          0.763
Slin_6210
Heme-binding protein (1141 aa)
   
          0.760
Slin_6430
alpha-L-rhamnosidase (757 aa)
   
          0.751
Slin_4377
Lipase (238 aa)
   
          0.744
Slin_3971
Hypothetical protein (595 aa)
 
          0.740
Slin_0511
Dehydrogenase (1265 aa)
   
          0.739
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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