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Slin_4785 protein (Spirosoma linguale) - STRING interaction network
"Slin_4785" - Altronate dehydratase in Spirosoma linguale
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_4785Altronate dehydratase (551 aa)    
Predicted Functional Partners:
Slin_1247
Mannitol dehydrogenase domain-containing protein (525 aa)
 
   
  0.987
Slin_1056
Mannitol dehydrogenase domain-containing protein (513 aa)
 
   
  0.987
Slin_3404
Short-chain dehydrogenase/reductase SDR (257 aa)
 
   
  0.939
Slin_6196
Mannonate dehydratase; Catalyzes the dehydration of D-mannonate (393 aa)
       
  0.937
Slin_3895
Mannonate dehydratase; Catalyzes the dehydration of D-mannonate (370 aa)
       
  0.937
Slin_1059
Mannonate dehydratase; Catalyzes the dehydration of D-mannonate (399 aa)
       
  0.937
Slin_3948
Muconate lactonizing mandelate racemase protein (451 aa)
 
 
  0.935
Slin_1069
Mannonate dehydratase; Catalyzes the dehydration of D-mannonate (375 aa)
       
  0.933
Slin_1246
PfkB domain-containing protein (342 aa)
 
   
  0.902
Slin_1057
PfkB domain-containing protein (330 aa)
 
   
  0.899
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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