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Slin_4788 protein (Spirosoma linguale) - STRING interaction network
"Slin_4788" - Xylan 1,4-beta-xylosidase in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_4788Xylan 1,4-beta-xylosidase (562 aa)    
Predicted Functional Partners:
Slin_4787
Pectinesterase (337 aa)
 
          0.967
Slin_1242
G-D-S-L family lipolytic protein (251 aa)
 
        0.799
Slin_1231
Lysophospholipase L1-like protein (280 aa)
 
        0.780
Slin_4784
Glycoside hydrolase family protein (551 aa)
          0.761
Slin_1253
Glycoside hydrolase family protein (544 aa)
          0.760
Slin_5374
Glycoside hydrolase family protein (442 aa)
          0.751
Slin_1024
Glycoside hydrolase family protein (644 aa)
 
          0.744
Slin_1224
Hypothetical protein (879 aa)
   
          0.739
Slin_1806
Glycoside hydrolase family protein (378 aa)
 
          0.727
Slin_0456
Glycoside hydrolase family protein (462 aa)
 
          0.683
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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