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Slin_4802 protein (Spirosoma linguale) - STRING interaction network
"Slin_4802" - Short-chain dehydrogenase/reductase SDR in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_4802Short-chain dehydrogenase/reductase SDR (267 aa)    
Predicted Functional Partners:
Slin_4803
Hypothetical protein (187 aa)
              0.862
Slin_4804
Class I and II aminotransferase (413 aa)
              0.741
Slin_3188
Short-chain dehydrogenase/reductase SDR (265 aa)
   
          0.625
Slin_2448
Short-chain dehydrogenase/reductase SDR (257 aa)
   
          0.584
Slin_6445
Short-chain dehydrogenase/reductase SDR (272 aa)
   
          0.499
Slin_4801
TonB-dependent receptor plug (1074 aa)
              0.488
Slin_4202
Short-chain dehydrogenase/reductase SDR (344 aa)
 
          0.481
Slin_4807
Alkyl hydroperoxide reductase/ thiol specific antioxidant/ Mal allergen (207 aa)
              0.477
Slin_4806
Hypothetical protein (313 aa)
              0.477
Slin_0197
Short-chain dehydrogenase/reductase SDR (280 aa)
   
          0.459
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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