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Slin_4879 protein (Spirosoma linguale) - STRING interaction network
"Slin_4879" - Hypothetical protein in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_4879Hypothetical protein (170 aa)    
Predicted Functional Partners:
Slin_1361
Gliding motility-associated protein GldC (118 aa)
   
          0.775
Slin_3235
Hypothetical protein (154 aa)
   
          0.774
Slin_5545
Hypothetical protein (165 aa)
   
          0.763
Slin_0301
Hypothetical protein (448 aa)
   
          0.757
Slin_5517
Hypothetical protein (117 aa)
   
          0.755
Slin_6378
TonB-dependent receptor plug (828 aa)
   
          0.739
Slin_4699
TonB-dependent receptor plug (799 aa)
   
          0.736
Slin_3236
TonB-dependent receptor (808 aa)
   
          0.735
Slin_1897
Hypothetical protein (340 aa)
   
          0.726
Slin_5680
Hypothetical protein (125 aa)
   
          0.714
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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