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Slin_4880 protein (Spirosoma linguale) - STRING interaction network
"Slin_4880" - DNA polymerase III subunit beta in Spirosoma linguale
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Slin_4880DNA polymerase III subunit beta; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3’ to 5’ exonuclease activity. The beta chain is required for initiation of replication once it is clamped onto DNA, it slides freely (bidirectional and ATP- independent) along duplex DNA (379 aa)    
Predicted Functional Partners:
Slin_0543
DNA polymerase I (1024 aa)
   
  0.999
Slin_0531
DNA polymerase III subunit alpha (1205 aa)
   
  0.999
Slin_1937
DNA polymerase III subunit delta (344 aa)
 
  0.997
Slin_0023
DNA polymerase III subunits gamma and tau (664 aa)
 
  0.994
Slin_6089
DNA polymerase III gamma/tau subunits-like protein (371 aa)
 
  0.994
mutS
DNA mismatch repair protein MutS; This protein is involved in the repair of mismatches in DNA. It is possible that it carries out the mismatch recognition step. This protein has a weak ATPase activity (886 aa)
   
  0.994
Slin_5542
DNA mismatch repair protein MutS (610 aa)
   
  0.993
Slin_5590
DNA-directed DNA polymerase (421 aa)
     
  0.992
dinB
DNA-directed DNA polymerase; Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3’-5’ exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII (359 aa)
     
  0.992
Slin_5255
DNA polymerase III subunit epsilon (180 aa)
 
 
  0.991
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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