STRINGSTRING
Slin_4885 protein (Spirosoma linguale) - STRING interaction network
"Slin_4885" - Rieske in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_4885Rieske (2Fe-2S) domain-containing protein (172 aa)    
Predicted Functional Partners:
Slin_5792
Peptidase M16 domain-containing protein (458 aa)
   
  0.997
Slin_5791
Peptidase M16 domain-containing protein (447 aa)
   
  0.997
Slin_5951
Peptidase M16 domain-containing protein (426 aa)
     
  0.996
Slin_5397
Peptidase M16 domain-containing protein (955 aa)
     
  0.996
Slin_4170
Peptidase M16 domain-containing protein (969 aa)
     
  0.996
Slin_3480
Peptidase M16 domain-containing protein (411 aa)
     
  0.996
Slin_1835
Peptidase M16 domain-containing protein (949 aa)
     
  0.996
Slin_1834
Peptidase M16 domain-containing protein (934 aa)
     
  0.996
Slin_0019
Peptidase M16 domain-containing protein (413 aa)
     
  0.996
atpG
ATP synthase F1 subunit gamma; Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex (297 aa)
     
   
  0.986
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
Server load: low (15%) [HD]