STRINGSTRING
Slin_4896 protein (Spirosoma linguale) - STRING interaction network
"Slin_4896" - Cytochrome C class I in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_4896Cytochrome C class I (142 aa)    
Predicted Functional Partners:
Slin_3562
Cytochrome C oxidase cbb3-type subunit I (736 aa)
 
  0.995
Slin_4873
Cytochrome C class I (306 aa)
 
          0.813
Slin_2175
Hypothetical protein (196 aa)
   
          0.669
Slin_0648
Cytochrome C family protein (332 aa)
 
          0.632
Slin_4895
Gliding motility-associated lipoprotein GldD (195 aa)
              0.579
Slin_5670
Cytochrome C oxidase subunit II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B) (373 aa)
 
 
  0.569
Slin_3559
Cytochrome C oxidase accessory protein CcoG (497 aa)
 
   
  0.536
Slin_4885
Rieske (2Fe-2S) domain-containing protein (172 aa)
   
   
  0.525
Slin_4897
AraC family transcriptional regulator (289 aa)
              0.522
Slin_5671
Cytochrome-c oxidase (627 aa)
   
   
  0.473
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
Server load: low (8%) [HD]