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Slin_4899 protein (Spirosoma linguale) - STRING interaction network
"Slin_4899" - methylcrotonoyl-CoA carboxylase in Spirosoma linguale
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_4899methylcrotonoyl-CoA carboxylase (536 aa)    
Predicted Functional Partners:
Slin_3536
Carbamoyl-phosphate synthase L chain ATP-binding protein (517 aa)
 
  0.997
Slin_2390
Biotin/lipoyl attachment domain-containing protein (168 aa)
 
 
  0.988
Slin_3003
biotin--acetyl-CoA-carboxylase ligase (269 aa)
   
  0.974
Slin_4454
Pyruvate carboxylase; Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second (1149 aa)
 
 
  0.972
Slin_5962
KpsF/GutQ family protein (322 aa)
   
  0.949
Slin_1193
Inosine-5’-monophosphate dehydrogenase (490 aa)
   
  0.944
Slin_1462
Signal transduction protein with CBS domains (145 aa)
     
  0.943
Slin_3023
hydroxymethylglutaryl-CoA lyase (280 aa)
 
 
  0.888
Slin_6109
3-hydroxyacyl-CoA dehydrogenase NAD-binding protein (718 aa)
 
   
  0.856
Slin_4424
3-hydroxyacyl-CoA dehydrogenase NAD-binding protein (811 aa)
   
   
  0.836
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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