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Slin_4922 protein (Spirosoma linguale) - STRING interaction network
"Slin_4922" - Hypothetical protein in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_4922Hypothetical protein (513 aa)    
Predicted Functional Partners:
Slin_4078
Lipopolysaccharide biosynthesis protein (349 aa)
   
          0.719
Slin_4936
Lipopolysaccharide biosynthesis protein (362 aa)
   
          0.687
Slin_6611
TonB-dependent receptor plug (1137 aa)
   
          0.672
Slin_4903
Organic solvent tolerance protein OstA-like protein (1210 aa)
   
          0.664
Slin_6635
RagB/SusD domain-containing protein (483 aa)
   
          0.643
Slin_5097
Hypothetical protein (727 aa)
   
          0.642
Slin_6612
Hypothetical protein (546 aa)
   
          0.623
Slin_2568
Ligand-binding protein (812 aa)
 
          0.618
Slin_2543
Hypothetical protein (607 aa)
   
          0.602
Slin_6188
TonB family protein (804 aa)
   
          0.585
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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