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Slin_4930 protein (Spirosoma linguale) - STRING interaction network
"Slin_4930" - Glycosyl transferase family protein in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_4930Glycosyl transferase family protein (289 aa)    
Predicted Functional Partners:
Slin_4928
Family 2 glycosyl transferase (234 aa)
     
  0.956
Slin_4927
Family 2 glycosyl transferase (309 aa)
 
     
  0.859
Slin_4929
Hypothetical protein (438 aa)
              0.851
Slin_4931
Family 2 glycosyl transferase (244 aa)
         
  0.760
Slin_5841
Glucose-1-phosphate thymidylyltransferase; Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis (286 aa)
 
     
  0.602
Slin_0434
dTDP-4-dehydrorhamnose 3,5-epimerase (181 aa)
 
   
  0.585
Slin_5840
dTDP-glucose 4,6-dehydratase (352 aa)
 
     
  0.554
Slin_4815
dTDP-4-dehydrorhamnose reductase (299 aa)
 
   
  0.530
Slin_2571
ABC transporter (419 aa)
   
   
  0.467
Slin_2463
ABC transporter (431 aa)
   
   
  0.467
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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