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Slin_4940 protein (Spirosoma linguale) - STRING interaction network
"Slin_4940" - Group 1 glycosyl transferase in Spirosoma linguale
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_4940Group 1 glycosyl transferase (375 aa)    
Predicted Functional Partners:
Slin_4939
Hypothetical protein (360 aa)
              0.834
Slin_4077
Nucleotide sugar dehydrogenase (444 aa)
 
        0.591
Slin_3338
Glycoside hydrolase family protein (382 aa)
   
          0.575
secA
Preprotein translocase subunit SecA; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane (1130 aa)
              0.567
Slin_6507
Group 1 glycosyl transferase (356 aa)
 
        0.566
Slin_4071
UDP-N-acetylglucosamine 2-epimerase (368 aa)
 
   
  0.563
Slin_0603
DegT/DnrJ/EryC1/StrS aminotransferase (470 aa)
 
        0.561
Slin_6578
Glutamine--scyllo-inositol transaminase (406 aa)
 
        0.554
Slin_4941
3-ketoacyl-ACP synthase I (312 aa)
              0.543
Slin_0290
DegT/DnrJ/EryC1/StrS aminotransferase (376 aa)
 
        0.542
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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