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Slin_4949 protein (Spirosoma linguale) - STRING interaction network
"Slin_4949" - Glucose-methanol-choline oxidoreductase in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_4949Glucose-methanol-choline oxidoreductase (574 aa)    
Predicted Functional Partners:
Slin_4950
Twin-arginine translocation pathway signal (212 aa)
 
     
  0.924
Slin_6564
Hypothetical protein (186 aa)
 
     
  0.856
Slin_5805
Hypothetical protein (176 aa)
 
     
  0.856
Slin_4689
Hypothetical protein (192 aa)
 
          0.779
Slin_1890
Hypothetical protein (171 aa)
   
          0.778
Slin_4771
Hypothetical protein (268 aa)
 
          0.686
Slin_4367
GMC oxidoreductase (554 aa)
   
     
  0.675
Slin_3436
Oxidoreductase domain-containing protein (378 aa)
 
          0.586
Slin_5523
Delta-1-pyrroline-5-carboxylate dehydrogenase (543 aa)
   
   
  0.553
Slin_4408
Aldehyde dehydrogenase (457 aa)
   
   
  0.553
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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