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Slin_4954 protein (Spirosoma linguale) - STRING interaction network
"Slin_4954" - TonB-dependent receptor plug in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_4954TonB-dependent receptor plug (1182 aa)    
Predicted Functional Partners:
Slin_3400
TonB-dependent receptor plug (1057 aa)
   
          0.736
Slin_0801
TonB-dependent receptor plug (1116 aa)
   
          0.734
Slin_6188
TonB family protein (804 aa)
   
          0.662
Slin_5616
Hypothetical protein (451 aa)
   
          0.624
Slin_4956
PilT protein domain-containing protein (132 aa)
              0.623
Slin_4955
Hypothetical protein (71 aa)
              0.623
Slin_5004
Hypothetical protein (1010 aa)
   
          0.605
Slin_4953
Response regulator receiver protein (135 aa)
              0.589
Slin_0802
Hypothetical protein (538 aa)
   
          0.589
Slin_4961
Hypothetical protein (257 aa)
   
          0.588
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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