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Slin_4972 protein (Spirosoma linguale) - STRING interaction network
"Slin_4972" - phytanoyl-CoA dioxygenase in Spirosoma linguale
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_4972phytanoyl-CoA dioxygenase (277 aa)    
Predicted Functional Partners:
Slin_5888
Adenosylmethionine-8-amino-7-oxononanoate aminotransferase (423 aa)
     
        0.650
bioD
Dethiobiotin synthase; Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring (210 aa)
     
        0.618
Slin_4971
AraC family transcriptional regulator (290 aa)
              0.616
Slin_4973
Cytochrome C biogenesis protein transmembrane region (699 aa)
              0.550
Slin_5627
Anthranilate phosphoribosyltransferase-like protein (419 aa)
   
          0.547
Slin_4197
DinB family protein (154 aa)
   
          0.544
Slin_3948
Muconate lactonizing mandelate racemase protein (451 aa)
   
        0.541
Slin_6070
Galactonate dehydratase (474 aa)
   
        0.516
Slin_0511
Dehydrogenase (1265 aa)
   
          0.504
Slin_4207
RagB/SusD domain-containing protein (451 aa)
   
          0.466
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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