STRINGSTRING
Slin_4977 protein (Spirosoma linguale) - STRING interaction network
"Slin_4977" - Metallophosphoesterase in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_4977Metallophosphoesterase (396 aa)    
Predicted Functional Partners:
Slin_4976
Endonuclease/exonuclease/phosphatase (266 aa)
          0.916
Slin_4978
RagB/SusD domain-containing protein (576 aa)
 
          0.890
Slin_4979
TonB-dependent receptor plug (1188 aa)
 
          0.874
Slin_6228
RagB/SusD domain-containing protein (511 aa)
   
          0.719
Slin_1885
Hypothetical protein (440 aa)
   
          0.715
Slin_5049
Inosine/uridine-preferring nucleoside hydrolase (333 aa)
   
          0.703
Slin_6229
TonB-dependent receptor plug (1137 aa)
   
          0.698
Slin_3008
Hypothetical protein (419 aa)
   
          0.680
Slin_1887
Kelch repeat-containing protein (358 aa)
   
          0.680
Slin_3951
RagB/SusD domain-containing protein (491 aa)
   
          0.656
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
Server load: low (12%) [HD]