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Slin_4987 protein (Spirosoma linguale) - STRING interaction network
"Slin_4987" - Hypothetical protein in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_4987Hypothetical protein (296 aa)    
Predicted Functional Partners:
rlmN
Radical SAM enzyme, Cfr family; Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs (349 aa)
              0.709
Slin_4532
TonB-dependent receptor (813 aa)
   
          0.707
Slin_4665
TonB-dependent receptor (739 aa)
   
          0.657
Slin_5254
Peptidase S41 (503 aa)
   
          0.598
Slin_4988
Colicin V production protein (181 aa)
              0.598
Slin_4530
Peptidase M75, Imelysin (384 aa)
   
          0.549
Slin_6149
Peptidase S41 (513 aa)
   
          0.509
Slin_6169
Hypothetical protein (392 aa)
   
          0.506
Slin_3018
Hypothetical protein (123 aa)
   
          0.499
Slin_6515
Rhodopsin (268 aa)
   
          0.494
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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