STRINGSTRING
Slin_5033 protein (Spirosoma linguale) - STRING interaction network
"Slin_5033" - Hypothetical protein in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_5033Hypothetical protein (168 aa)    
Predicted Functional Partners:
Slin_3372
Hypothetical protein (455 aa)
   
          0.670
Slin_2270
Hypothetical protein (464 aa)
   
          0.652
Slin_1383
Hypothetical protein (487 aa)
   
          0.644
Slin_0283
Hypothetical protein (221 aa)
   
          0.642
Slin_5725
Hypothetical protein (198 aa)
   
          0.547
Slin_1212
Endonuclease/exonuclease/phosphatase (372 aa)
   
          0.536
Slin_4096
Hypothetical protein (164 aa)
   
          0.533
Slin_4939
Hypothetical protein (360 aa)
   
          0.519
Slin_1613
Lipoprotein (345 aa)
   
          0.517
recA
recA protein; Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage (364 aa)
              0.511
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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