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Slin_5035 protein (Spirosoma linguale) - STRING interaction network
"Slin_5035" - Hypothetical protein in Spirosoma linguale
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_5035Hypothetical protein (214 aa)    
Predicted Functional Partners:
recA
recA protein; Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage (364 aa)
              0.549
Slin_3434
Hypothetical protein (78 aa)
   
          0.510
Slin_4956
PilT protein domain-containing protein (132 aa)
   
          0.506
Slin_4541
Transposase IS200-like protein (148 aa)
   
          0.489
Slin_5910
Hypothetical protein (77 aa)
   
          0.487
Slin_0325
Cell surface receptor IPT/TIG domain-containing protein (597 aa)
   
          0.486
Slin_1803
Hypothetical protein (147 aa)
   
          0.479
Slin_4573
PilT protein domain-containing protein (136 aa)
   
          0.456
Slin_0220
Hypothetical protein (242 aa)
   
          0.434
Slin_5713
Peptidase S41; Degrades oligopeptides (1097 aa)
   
          0.420
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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