STRINGSTRING
recX protein (Spirosoma linguale) - STRING interaction network
"recX" - Regulatory protein RecX in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
recXRegulatory protein RecX; Modulates RecA activity (151 aa)    
Predicted Functional Partners:
recO
DNA repair protein RecO; Involved in DNA repair and RecF pathway recombination (230 aa)
 
          0.676
Slin_5047
Family 2 glycosyl transferase (315 aa)
              0.651
Slin_2385
Hypothetical protein (901 aa)
   
          0.618
Slin_1307
Outer membrane assembly lipoprotein YfiO (299 aa)
   
          0.568
Slin_5854
Outer membrane lipoprotein carrier protein LolA (213 aa)
   
          0.564
Slin_4064
Hypothetical protein (180 aa)
   
          0.554
Slin_5049
Inosine/uridine-preferring nucleoside hydrolase (333 aa)
              0.539
Slin_4915
Hypothetical protein (150 aa)
   
          0.533
Slin_0008
Hypothetical protein (263 aa)
   
          0.533
Slin_6518
Hypothetical protein (309 aa)
   
          0.531
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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