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Slin_5049 protein (Spirosoma linguale) - STRING interaction network
"Slin_5049" - Inosine/uridine-preferring nucleoside hydrolase in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_5049Inosine/uridine-preferring nucleoside hydrolase (333 aa)    
Predicted Functional Partners:
Slin_0108
Hypothetical protein (668 aa)
   
          0.726
Slin_4977
Metallophosphoesterase (396 aa)
   
          0.703
Slin_0536
Glycoside hydrolase family protein (393 aa)
   
          0.691
Slin_1842
Xylose isomerase (287 aa)
   
          0.671
Slin_0966
Hypothetical protein (259 aa)
   
          0.670
Slin_0591
Hypothetical protein (327 aa)
   
          0.646
Slin_3971
Hypothetical protein (595 aa)
   
          0.640
Slin_5050
Glutathionylspermidine synthase (390 aa)
              0.636
Slin_2647
Sugar permease (331 aa)
 
          0.616
Slin_0379
Sugar permease (330 aa)
 
          0.613
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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