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Slin_5069 protein (Spirosoma linguale) - STRING interaction network
"Slin_5069" - ApbE family lipoprotein in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_5069ApbE family lipoprotein; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein (336 aa)    
Predicted Functional Partners:
Slin_1500
PepSY-associated TM helix domain-containing protein (212 aa)
 
          0.658
Slin_5070
Hypothetical protein (67 aa)
              0.656
Slin_1501
ApbE family lipoprotein (509 aa)
 
       
0.559
Slin_1971
DNA repair protein RadC (157 aa)
 
          0.511
Slin_3063
Hypothetical protein (288 aa)
 
          0.499
Slin_0523
DNA repair protein RadC (231 aa)
 
          0.498
Slin_1875
Hypothetical protein (147 aa)
          0.482
Slin_3559
Cytochrome C oxidase accessory protein CcoG (497 aa)
 
     
  0.472
Slin_4405
Hypothetical protein (334 aa)
 
          0.461
Slin_6627
Gliding motility-associated ABC transporter permease GldF (240 aa)
         
  0.457
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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