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Slin_5073 protein (Spirosoma linguale) - STRING interaction network
"Slin_5073" - Hypothetical protein in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_5073Hypothetical protein (483 aa)    
Predicted Functional Partners:
Slin_2667
Von Willebrand factor A (320 aa)
 
     
  0.770
Slin_3587
Hypothetical protein (1087 aa)
   
          0.748
Slin_0230
Hypothetical protein (969 aa)
   
          0.746
Slin_0229
Hypothetical protein (963 aa)
   
          0.746
Slin_3219
Hypothetical protein (749 aa)
   
          0.730
Slin_5122
Hypothetical protein (1005 aa)
   
          0.713
Slin_6621
Hypothetical protein (2541 aa)
   
          0.709
Slin_5683
Hypothetical protein (330 aa)
   
          0.707
aroC
Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system (359 aa)
              0.706
Slin_6385
Hypothetical protein (694 aa)
   
          0.701
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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