STRINGSTRING
Slin_5075 protein (Spirosoma linguale) - STRING interaction network
"Slin_5075" - Beta-lactamase in Spirosoma linguale
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query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_5075Beta-lactamase (464 aa)    
Predicted Functional Partners:
Slin_0543
DNA polymerase I (1024 aa)
     
  0.977
rpoC
DNA-directed RNA polymerase subunit beta’; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (1449 aa)
     
    0.960
Slin_5691
DEAD/DEAH box helicase (475 aa)
   
    0.949
Slin_3331
DEAD/DEAH box helicase (441 aa)
   
    0.949
Slin_3330
DEAD/DEAH box helicase (447 aa)
   
    0.949
Slin_3329
DEAD/DEAH box helicase (380 aa)
   
    0.949
Slin_2449
DEAD/DEAH box helicase (485 aa)
   
    0.949
Slin_1766
DEAD/DEAH box helicase (535 aa)
   
    0.949
Slin_0250
DEAD/DEAH box helicase (643 aa)
   
    0.949
fusA
Translation elongation factor G; Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome (702 aa)
     
 
    0.942
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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