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Slin_5124 protein (Spirosoma linguale) - STRING interaction network
"Slin_5124" - 4-alpha-glucanotransferase in Spirosoma linguale
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_51244-alpha-glucanotransferase (525 aa)    
Predicted Functional Partners:
Slin_4791
Trehalose synthase (1114 aa)
   
 
  0.973
Slin_0347
Alpha amylase (522 aa)
 
 
  0.972
Slin_3551
Alpha-glucan phosphorylase (567 aa)
   
 
  0.972
Slin_0361
Alpha amylase (958 aa)
 
 
  0.952
Slin_3625
Alpha amylase (571 aa)
 
 
  0.948
Slin_3114
Alpha amylase (579 aa)
 
 
  0.948
glgE
Alpha amylase; Maltosyltransferase that uses maltose 1-phosphate (M1P) as the sugar donor to elongate linear or branched alpha-(1->4)- glucans. Is involved in a branched alpha-glucan biosynthetic pathway from trehalose, together with TreS, Mak and GlgB (681 aa)
   
 
  0.948
Slin_2883
Alpha amylase (630 aa)
 
 
  0.948
Slin_2541
Alpha amylase (467 aa)
   
    0.917
Slin_4447
Aldose 1-epimerase (290 aa)
   
   
    0.917
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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