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Slin_5147 protein (Spirosoma linguale) - STRING interaction network
"Slin_5147" - HAD-superfamily hydrolase in Spirosoma linguale
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_5147HAD-superfamily hydrolase (282 aa)    
Predicted Functional Partners:
Slin_5145
Hypothetical protein (199 aa)
 
          0.661
Slin_5146
Electron transporter SCO1/SenC (228 aa)
              0.573
Slin_5144
Hypothetical protein (267 aa)
              0.573
Slin_5148
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis (79 aa)
   
        0.539
tyrS
tyrosyl-tRNA synthetase; Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction- tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr) (433 aa)
 
        0.528
Slin_5139
Glutamate--ammonia ligase (457 aa)
 
        0.508
Slin_2566
Chorismate mutase (357 aa)
   
        0.504
Slin_1303
DNA repair protein RecN; May be involved in recombinational repair of damaged DNA (557 aa)
 
        0.496
Slin_2730
RagB/SusD domain-containing protein (447 aa)
   
          0.487
Slin_2732
Hypothetical protein (449 aa)
   
          0.480
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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