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Slin_5177 protein (Spirosoma linguale) - STRING interaction network
"Slin_5177" - Family 2 glycosyl transferase in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_5177Family 2 glycosyl transferase (256 aa)    
Predicted Functional Partners:
Slin_2975
NAD-dependent epimerase/dehydratase (353 aa)
 
   
  0.844
Slin_5183
NAD-dependent epimerase/dehydratase (357 aa)
 
   
  0.807
Slin_6291
NAD-dependent epimerase/dehydratase (357 aa)
 
   
  0.770
Slin_6411
NAD-dependent epimerase/dehydratase (357 aa)
 
   
  0.761
Slin_5178
Aldo/keto reductase (324 aa)
   
        0.756
Slin_2546
Family 2 glycosyl transferase (253 aa)
   
          0.734
Slin_5209
Family 2 glycosyl transferase (243 aa)
   
          0.725
Slin_3526
Nucleotide sugar dehydrogenase (443 aa)
 
   
  0.596
Slin_6090
Hypothetical protein (398 aa)
   
 
  0.571
Slin_6507
Group 1 glycosyl transferase (356 aa)
 
 
  0.569
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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