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Slin_5182 protein (Spirosoma linguale) - STRING interaction network
"Slin_5182" - Hypothetical protein in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_5182Hypothetical protein (315 aa)    
Predicted Functional Partners:
Slin_2575
Transferase (217 aa)
 
          0.860
Slin_2574
WbqC-like family protein (232 aa)
 
          0.766
Slin_5181
Hypothetical protein (274 aa)
              0.574
Slin_5183
NAD-dependent epimerase/dehydratase (357 aa)
              0.559
Slin_1687
Hypothetical protein (751 aa)
   
          0.556
Slin_2572
DegT/DnrJ/EryC1/StrS aminotransferase (369 aa)
 
          0.505
Slin_3610
Peptidoglycan-binding protein (155 aa)
   
          0.502
Slin_5180
Family 2 glycosyl transferase (322 aa)
              0.478
Slin_5687
Sugar O-acyltransferase, sialic acid O- acetyltransferase NeuD family (210 aa)
 
          0.475
Slin_0289
WxcM domain-containing protein (135 aa)
 
          0.471
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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