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Slin_5185 protein (Spirosoma linguale) - STRING interaction network
"Slin_5185" - Oligoendopeptidase in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_5185Oligoendopeptidase (580 aa)    
Predicted Functional Partners:
Slin_5184
Hypothetical protein (92 aa)
              0.634
Slin_0526
Hypothetical protein (354 aa)
   
          0.632
Slin_3224
Gliding motility-associated protein GldL (272 aa)
   
          0.592
Slin_5186
CopY family transcriptional regulator (121 aa)
              0.554
Slin_5187
Peptidase M56 BlaR1 (750 aa)
              0.492
comB
2-phosphosulfolactate phosphatase (236 aa)
   
          0.452
Slin_5924
GH3 auxin-responsive promoter (500 aa)
   
          0.449
Slin_1108
D-alanine--D-alanine ligase; Cell wall formation (551 aa)
   
          0.447
Slin_2039
Hypothetical protein (558 aa)
   
          0.441
Slin_0019
Peptidase M16 domain-containing protein (413 aa)
   
 
      0.436
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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