STRINGSTRING
Slin_5190 protein (Spirosoma linguale) - STRING interaction network
"Slin_5190" - Cytochrome b5 in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_5190Cytochrome b5 (82 aa)    
Predicted Functional Partners:
Slin_5189
N-acetylglucosamine kinase-like protein (281 aa)
              0.766
Slin_1448
Cytochrome C biogenesis protein CcmB (224 aa)
   
          0.689
Slin_5191
Hypothetical protein (148 aa)
              0.634
Slin_5981
Hypothetical protein (298 aa)
   
          0.598
Slin_5875
Hypothetical protein (134 aa)
   
          0.551
Slin_2451
Hypothetical protein (257 aa)
   
          0.551
Slin_5679
Hypothetical protein (91 aa)
   
          0.549
Slin_5353
Hypothetical protein (51 aa)
   
          0.533
Slin_1442
Cytochrome C assembly protein (888 aa)
   
          0.513
Slin_0526
Hypothetical protein (354 aa)
   
          0.479
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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