STRINGSTRING
Slin_5194 protein (Spirosoma linguale) - STRING interaction network
"Slin_5194" - Beta-lactamase in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_5194Beta-lactamase (323 aa)    
Predicted Functional Partners:
Slin_0038
Peptidase S45 penicillin amidase (807 aa)
         
    0.900
Slin_5195
Hypothetical protein (190 aa)
              0.859
Slin_3212
Beta-lactamase (304 aa)
   
   
 
0.857
Slin_3334
Beta-lactamase (349 aa)
   
   
 
0.855
Slin_0576
Peptidase M1 membrane alanine aminopeptidase (869 aa)
 
            0.698
Slin_1934
Muconate lactonizing mandelate racemase protein (355 aa)
 
          0.617
Slin_0431
Hypothetical protein (341 aa)
   
          0.557
Slin_0013
Muconate lactonizing mandelate racemase protein (366 aa)
 
          0.552
Slin_6349
Muconate lactonizing mandelate racemase protein (340 aa)
 
          0.549
Slin_6193
Muconate lactonizing mandelate racemase protein (425 aa)
 
          0.546
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
Server load: low (8%) [HD]