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Slin_5209 protein (Spirosoma linguale) - STRING interaction network
"Slin_5209" - Family 2 glycosyl transferase in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_5209Family 2 glycosyl transferase (243 aa)    
Predicted Functional Partners:
Slin_5208
Hypothetical protein (135 aa)
 
          0.965
Slin_5206
Glycosyl transferase family protein (401 aa)
         
  0.874
Slin_5207
Family 2 glycosyl transferase (254 aa)
              0.859
Slin_5210
Hypothetical protein (695 aa)
              0.840
Slin_5177
Family 2 glycosyl transferase (256 aa)
   
          0.725
Slin_5211
Hypothetical protein (333 aa)
              0.614
Slin_2953
Family 2 glycosyl transferase (244 aa)
   
          0.587
Slin_6090
Hypothetical protein (398 aa)
   
 
  0.571
Slin_3852
Family 2 glycosyl transferase (321 aa)
 
     
  0.562
Slin_4074
Group 1 glycosyl transferase (339 aa)
 
 
  0.551
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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