STRINGSTRING
Slin_5211 protein (Spirosoma linguale) - STRING interaction network
"Slin_5211" - Hypothetical protein in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_5211Hypothetical protein (333 aa)    
Predicted Functional Partners:
Slin_1309
Hypothetical protein (614 aa)
   
          0.776
Slin_1664
GH3 auxin-responsive promoter (514 aa)
   
          0.742
Slin_2040
Sporulation domain-containing protein (380 aa)
   
          0.738
Slin_5651
GH3 auxin-responsive promoter (507 aa)
   
          0.726
Slin_5551
Peptidase M28 (343 aa)
   
          0.705
Slin_1299
Hypothetical protein (197 aa)
   
          0.701
Slin_1369
WbqC-like family protein (217 aa)
   
          0.698
Slin_5924
GH3 auxin-responsive promoter (500 aa)
   
          0.696
Slin_0436
Hypothetical protein (429 aa)
   
          0.691
Slin_5854
Outer membrane lipoprotein carrier protein LolA (213 aa)
 
          0.675
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
Server load: low (7%) [HD]