STRINGSTRING
Slin_5260 protein (Spirosoma linguale) - STRING interaction network
"Slin_5260" - Glycosyltransferase in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_5260Glycosyltransferase (405 aa)    
Predicted Functional Partners:
Slin_4165
UDP-galactopyranose mutase (373 aa)
          0.955
Slin_0222
Amine oxidase (402 aa)
          0.936
Slin_5261
Glycoside hydrolase family protein (453 aa)
          0.856
Slin_5470
Glycoside hydrolase family protein (446 aa)
          0.854
Slin_4161
Glycoside hydrolase family protein (451 aa)
          0.816
Slin_5259
Hypothetical protein (229 aa)
              0.703
Slin_5258
Hypothetical protein (228 aa)
              0.692
Slin_2005
Hypothetical protein (192 aa)
   
          0.514
Slin_4132
Hypothetical protein (202 aa)
   
          0.496
Slin_2570
ABC transporter (279 aa)
 
          0.472
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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