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Slin_5283 protein (Spirosoma linguale) - STRING interaction network
"Slin_5283" - G6PDH family F420-dependent oxidoreductase in Spirosoma linguale
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_5283G6PDH family F420-dependent oxidoreductase (326 aa)    
Predicted Functional Partners:
Slin_5284
Hypothetical protein (123 aa)
              0.775
Slin_5281
Malto-oligosyltrehalose trehalohydrolase (642 aa)
 
        0.747
Slin_0477
NADPH-dependent FMN reductase (181 aa)
   
 
  0.716
Slin_5282
Malto-oligosyltrehalose synthase (1411 aa)
              0.703
Slin_5285
NUDIX hydrolase (228 aa)
              0.591
Slin_2339
Radical SAM domain-containing protein (350 aa)
   
          0.504
Slin_6559
Coenzyme F420-dependent NADP oxidoreductase (202 aa)
 
     
  0.495
Slin_3805
Coenzyme F420-dependent NADP oxidoreductase (203 aa)
 
     
  0.482
Slin_3105
Group 1 glycosyl transferase (328 aa)
   
          0.465
Slin_4131
Hypothetical protein (165 aa)
   
          0.453
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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