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Slin_5318 protein (Spirosoma linguale) - STRING interaction network
"Slin_5318" - Hypothetical protein in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_5318Hypothetical protein (585 aa)    
Predicted Functional Partners:
Slin_5319
Hypothetical protein (307 aa)
              0.662
Slin_0301
Hypothetical protein (448 aa)
   
          0.659
Slin_5341
Hypothetical protein (300 aa)
   
          0.573
Slin_2382
Hypothetical protein (498 aa)
   
          0.534
Slin_2123
Hypothetical protein (1073 aa)
   
          0.508
Slin_4535
Hypothetical protein (125 aa)
   
          0.495
Slin_3257
Hypothetical protein (185 aa)
   
          0.494
Slin_4534
TonB-dependent receptor (779 aa)
   
          0.488
Slin_5317
Hypothetical protein (364 aa)
              0.486
Slin_1961
Hypothetical protein (266 aa)
   
          0.485
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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