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rimO protein (Spirosoma linguale) - STRING interaction network
"rimO" - MiaB-like tRNA modifying protein YliG in Spirosoma linguale
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
rimOMiaB-like tRNA modifying protein YliG; Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12 (437 aa)    
Predicted Functional Partners:
Slin_5358
Hypothetical protein (227 aa)
              0.745
Slin_5357
Hypothetical protein (171 aa)
              0.745
Slin_5356
Hypothetical protein (68 aa)
              0.745
bshC
Hypothetical protein (515 aa)
 
          0.655
ftsY
Signal recognition particle-docking protein FtsY; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC) (318 aa)
 
        0.651
Slin_5169
Protein-export membrane protein SecD; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA (1029 aa)
 
   
  0.623
rlmN
Radical SAM enzyme, Cfr family; Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs (349 aa)
 
   
  0.606
pnp
Polyribonucleotide nucleotidyltransferase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3’- to 5’-direction (708 aa)
 
        0.605
guaA
GMP synthase; Catalyzes the synthesis of GMP from XMP (510 aa)
   
   
  0.594
Slin_1193
Inosine-5’-monophosphate dehydrogenase (490 aa)
   
        0.556
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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