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Slin_5366 protein (Spirosoma linguale) - STRING interaction network
"Slin_5366" - Hypothetical protein in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_5366Hypothetical protein (556 aa)    
Predicted Functional Partners:
Slin_5365
ABC transporter (256 aa)
 
          0.958
asd
Aspartate-semialdehyde dehydrogenase; Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate (337 aa)
              0.532
Slin_2844
N-acetyltransferase GCN5 (150 aa)
   
          0.468
Slin_4309
Hypothetical protein (416 aa)
   
          0.463
Slin_3399
Hypothetical protein (531 aa)
   
          0.463
Slin_4506
Hypothetical protein (436 aa)
   
          0.437
Slin_0801
TonB-dependent receptor plug (1116 aa)
   
          0.434
Slin_3400
TonB-dependent receptor plug (1057 aa)
   
          0.423
Slin_4946
Hypothetical protein (711 aa)
   
          0.408
Slin_5970
PA-phosphatase-like phosphoesterase (212 aa)
   
          0.404
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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