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Slin_5374 protein (Spirosoma linguale) - STRING interaction network
"Slin_5374" - Glycoside hydrolase family protein in Spirosoma linguale
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_5374Glycoside hydrolase family protein (442 aa)    
Predicted Functional Partners:
Slin_1024
Glycoside hydrolase family protein (644 aa)
          0.867
Slin_4787
Pectinesterase (337 aa)
 
   
  0.864
Slin_1806
Glycoside hydrolase family protein (378 aa)
 
          0.856
Slin_0456
Glycoside hydrolase family protein (462 aa)
          0.838
Slin_1224
Hypothetical protein (879 aa)
 
          0.787
Slin_1231
Lysophospholipase L1-like protein (280 aa)
 
        0.787
Slin_1242
G-D-S-L family lipolytic protein (251 aa)
        0.776
Slin_4788
Xylan 1,4-beta-xylosidase (562 aa)
          0.751
kduI
4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase; Catalyzes the isomerization of 5-dehydro-4-deoxy-D- glucuronate to 3-deoxy-D-glycero-2,5-hexodiulosonate (286 aa)
 
          0.643
Slin_1419
Glycoside hydrolase (648 aa)
   
          0.635
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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