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Slin_5402 protein (Spirosoma linguale) - STRING interaction network
"Slin_5402" - Major facilitator superfamily protein in Spirosoma linguale
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_5402Major facilitator superfamily protein (431 aa)    
Predicted Functional Partners:
Slin_5401
Molybdopterin oxidoreductase (1228 aa)
 
 
  0.995
Slin_5407
Nitrite reductase (NAD(P)H) small subunit (117 aa)
 
 
  0.993
Slin_5406
Nitrite reductase (NAD(P)H) large subunit (837 aa)
 
 
  0.988
Slin_5405
uroporphyrin-III C-methyltransferase (252 aa)
   
   
  0.902
Slin_5403
Hypothetical protein (519 aa)
 
          0.872
Slin_2052
uroporphyrin-III C-methyltransferase (266 aa)
   
   
  0.828
Slin_5941
FAD-dependent pyridine nucleotide-disulfide oxidoreductase (526 aa)
   
   
  0.735
Slin_0131
Molybdopterin oxidoreductase (788 aa)
 
   
  0.622
moaA
Molybdenum cofactor biosynthesis protein A; Catalyzes, together with MoaC, the conversion of 5’-GTP to cyclic pyranopterin monophosphate (cPMP or molybdopterin precursor Z) (326 aa)
 
   
  0.564
Slin_2051
Sulfite reductase (720 aa)
   
   
  0.504
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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