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Slin_5403 protein (Spirosoma linguale) - STRING interaction network
"Slin_5403" - Hypothetical protein in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_5403Hypothetical protein (519 aa)    
Predicted Functional Partners:
Slin_5402
Major facilitator superfamily protein (431 aa)
 
          0.872
Slin_5393
Hypothetical protein (1303 aa)
   
          0.770
Slin_5401
Molybdopterin oxidoreductase (1228 aa)
 
          0.755
Slin_5991
Peptidase S8/S53 subtilisin kexin sedolisin (1343 aa)
   
          0.747
Slin_1885
Hypothetical protein (440 aa)
   
          0.739
Slin_3399
Hypothetical protein (531 aa)
   
          0.729
Slin_0202
Hypothetical protein (487 aa)
   
          0.717
Slin_4115
Hypothetical protein (2278 aa)
   
          0.714
Slin_0205
Hypothetical protein (489 aa)
   
          0.714
Slin_5990
Hypothetical protein (925 aa)
   
          0.712
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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