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Slin_5423 protein (Spirosoma linguale) - STRING interaction network
"Slin_5423" - Hypothetical protein in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_5423Hypothetical protein (134 aa)    
Predicted Functional Partners:
Slin_5422
Hypothetical protein (207 aa)
 
          0.967
Slin_5421
Hypothetical protein (188 aa)
              0.617
Slin_5424
NUDIX hydrolase (254 aa)
              0.616
Slin_2526
Rieske (2Fe-2S) domain-containing protein (350 aa)
   
          0.576
Slin_5425
Hypothetical protein (58 aa)
              0.563
Slin_0092
MarR family transcriptional regulator (147 aa)
   
          0.511
Slin_5429
Hypothetical protein (205 aa)
 
          0.472
Slin_4284
Radical SAM protein (352 aa)
   
          0.453
Slin_5427
Aldehyde oxidase and xanthine dehydrogenase molybdopterin binding protein (734 aa)
              0.437
Slin_5426
(2Fe-2S)-binding domain-containing protein (187 aa)
              0.437
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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