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Slin_5428 protein (Spirosoma linguale) - STRING interaction network
"Slin_5428" - Xanthine dehydrogenase in Spirosoma linguale
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_5428Xanthine dehydrogenase (389 aa)    
Predicted Functional Partners:
Slin_5429
Hypothetical protein (205 aa)
   
  0.983
Slin_5426
(2Fe-2S)-binding domain-containing protein (187 aa)
 
   
  0.950
Slin_5427
Aldehyde oxidase and xanthine dehydrogenase molybdopterin binding protein (734 aa)
 
   
  0.932
Slin_3943
Purine nucleoside phosphorylase I; The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate (271 aa)
       
    0.900
Slin_0111
(2Fe-2S)-binding domain-containing protein (214 aa)
 
   
  0.866
Slin_2371
(2Fe-2S)-binding domain-containing protein (180 aa)
 
   
  0.866
Slin_2189
(2Fe-2S)-binding domain-containing protein (215 aa)
 
   
  0.866
Slin_2182
(2Fe-2S)-binding domain-containing protein (212 aa)
 
   
  0.857
Slin_6243
(2Fe-2S)-binding domain-containing protein (151 aa)
 
   
  0.848
Slin_1103
(2Fe-2S)-binding domain-containing protein (163 aa)
 
   
  0.848
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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