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Slin_5438 protein (Spirosoma linguale) - STRING interaction network
"Slin_5438" - Cell surface receptor IPT/TIG domain-containing protein in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_5438Cell surface receptor IPT/TIG domain-containing protein (561 aa)    
Predicted Functional Partners:
Slin_5439
TonB-dependent receptor plug (962 aa)
 
     
  0.953
Slin_6376
TonB-dependent receptor (920 aa)
   
          0.768
Slin_2398
TonB-dependent receptor plug (932 aa)
   
          0.740
Slin_6577
Thiamine monophosphate synthase (201 aa)
   
          0.645
Slin_3291
Integrase family protein (450 aa)
   
          0.559
Slin_6549
Peptidase M28 (551 aa)
   
          0.558
Slin_0068
PAS/PAC sensor signal transduction histidine kinase (604 aa)
 
          0.493
Slin_1085
Peptidase S9B dipeptidylpeptidase IV domain-containing protein (718 aa)
   
          0.452
Slin_1866
Peptidase M28 (503 aa)
   
          0.436
Slin_3121
TonB-dependent siderophore receptor (809 aa)
 
          0.426
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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