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Slin_5441 protein (Spirosoma linguale) - STRING interaction network
"Slin_5441" - Hypothetical protein in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_5441Hypothetical protein (490 aa)    
Predicted Functional Partners:
crcB
CrcB protein; Important for reducing fluoride concentration in the cell, thus reducing its toxicity (125 aa)
              0.859
Slin_5517
Hypothetical protein (117 aa)
   
          0.674
Slin_3616
Hypothetical protein (359 aa)
   
          0.654
Slin_5443
Amino acid permease-associated protein (463 aa)
   
        0.618
Slin_4984
Phospholipid/glycerol acyltransferase (251 aa)
   
          0.617
rpmF
50S ribosomal protein L32 (64 aa)
   
          0.594
Slin_5679
Hypothetical protein (91 aa)
   
          0.561
Slin_4914
Transketolase (801 aa)
 
          0.536
Slin_4583
acyl-ACP desaturase (325 aa)
   
          0.524
Slin_5545
Hypothetical protein (165 aa)
   
          0.519
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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